C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calpain 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354537 CAPN9-002 ENSG00000135773 9606 + 1:230747415-230802003 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryENST00000354537
Transcript ID Lung Ovary
ENST00000354537 0.417±0.00 0.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WK CIL_0007WK_0001 VISTA 1:230548777-231152235
CIL_000615 CIL_000615_0001 CGP 1:230702523-230802003
CIL_000616 CIL_000616_0001 CGP 1:230747384-230869589

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004198 IBA:IEA calcium-dependent cysteine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0005737 IBA cytoplasm
GO:0006508 IBA:IEA proteolysis
GO:0007586 IEA digestion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093033 Capn9-001 protein_coding Mus_musculus 0 870
ENSMUST00000133086 Capn9-002 protein_coding Mus_musculus 3e-27 128

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