C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354700 ACAP3-001 ENSG00000131584 9606 - 1:1292376-1308018 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000354700
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000354700 13.266±3.50 16.460±0.00 30.621±0.00 5.430±4.39 13.115±0.00 4.706±1.09 1.689±0.00 27.428±16.39 9.939±2.75 16.414±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059X CIL_00059X_0002 CGP 1:1292376-1311677

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105584 Acap3-201 protein_coding Mus_musculus 0 2784
ENSMUST00000079031 Acap3-001 protein_coding Mus_musculus 0 2723
ENSMUST00000137726 Acap3-002 processed_transcript Mus_musculus 0 1993
ENSMUST00000131168 Acap3-003 processed_transcript Mus_musculus 0 686
ENSMUST00000131372 Acap3-007 processed_transcript Mus_musculus 0 518
ENSMUST00000126582 Acap3-004 processed_transcript Mus_musculus 0 512
ENSMUST00000145654 Acap3-006 retained_intron Mus_musculus 0 361

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