C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: testis specific, 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355053 TSGA10-002 ENSG00000135951 9606 - 2:98997886-99141572 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderTestisENST00000355053
Transcript ID Bladder Testis
ENST00000355053 1.241±0.00 8.931±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034C CIL_00034C_0001 CGP 2:98793846-99154964

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0007283 TAS spermatogenesis
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041815 Tsga10-001 protein_coding Mus_musculus 0 2870
ENSMUST00000114902 Tsga10-003 protein_coding Mus_musculus 0 2630
ENSMUST00000088072 Tsga10-002 protein_coding Mus_musculus 0 1936
ENSMUST00000151735 Tsga10-004 nonsense_mediated_decay Mus_musculus 0 1024
ENSMUST00000155852 Tsga10-005 retained_intron Mus_musculus 0 610
ENSMUST00000123082 Tsga10-006 retained_intron Mus_musculus 0 610

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