C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myeloid leukemia factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355893 MLF1-001 ENSG00000178053 9606 + 3:158571163-158606460 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000355893
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000355893 0.244±0.00 0.929±0.00 2.081±0.00 1.236±0.00 0.665±0.00 3.994±0.00 1.008±0.00 1.527±0.00 1.757±0.41 1.111±0.78 1.360±0.30 0.178±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BN CIL_0008BN_0001 VISTA 3:157971822-158572677
CIL_00086V CIL_00086V_0001 VISTA 3:157991733-158593047
CIL_0008BM CIL_0008BM_0001 VISTA 3:158007957-158609595
CIL_0008KO CIL_0008KO_0001 VISTA 3:158067861-158669043
CIL_000808 CIL_000808_0001 VISTA 3:158183764-158784540
CIL_000815 CIL_000815_0001 VISTA 3:158228062-158828791
CIL_000937 CIL_000937_0001 VISTA 3:158468467-159075583
CIL_0004JV CIL_0004JV_0002 CGP 3:158571163-158692575

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002318 ISS myeloid progenitor cell differentiation
GO:0003677 ISS DNA binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006351 ISS transcription, DNA-templated
GO:0007050 IDA cell cycle arrest
GO:0019904 IDA protein domain specific binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077916 Mlf1-001 protein_coding Mus_musculus 0 953
ENSMUST00000061322 Mlf1-002 protein_coding Mus_musculus 0 741
ENSMUST00000126628 Mlf1-004 processed_transcript Mus_musculus 0 289

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