C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: piwi-like RNA-mediated gene silencing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356766 PIWIL2-001 ENSG00000197181 9606 + 8:22275297-22357563 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000356766
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000356766 0.213±0.00 0.098±0.00 0.111±0.00 0.431±0.00 0.139±0.00 0.108±0.00 0.099±0.00 0.079±0.00 0.193±0.16 0.047±0.00 13.758±1.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000810 CIL_000810_0001 VISTA 8:21687877-22288944
CIL_0008ZI CIL_0008ZI_0001 VISTA 8:21743578-22344815
CIL_000812 CIL_000812_0001 VISTA 8:21749915-22350771

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000966 ISS RNA 5'-end processing
GO:0003676 IEA nucleic acid binding
GO:0003729 IEA mRNA binding
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0005844 IEA polysome
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0030718 ISS germ-line stem cell maintenance
GO:0031047 ISS gene silencing by RNA
GO:0033391 ISS chromatoid body
GO:0034584 ISS piRNA binding
GO:0034587 ISS piRNA metabolic process
GO:0043046 ISS DNA methylation involved in gamete generation
GO:0043186 ISS P granule
GO:0045727 ISS positive regulation of translation
GO:0048477 ISS oogenesis
GO:0051321 IEA meiotic cell cycle
GO:0060903 IEA positive regulation of meiosis I
GO:0071546 ISS pi-body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048129 Piwil2-201 protein_coding Mus_musculus 0 3145

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