C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 254
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357002 ZNF254-001 ENSG00000213096 9606 + 19:24087193-24129852 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357002
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357002 0.438±0.00 0.793±0.00 2.049±1.06 0.823±0.00 1.622±0.69 0.814±0.41 1.941±0.22 0.868±0.06 1.580±0.25 0.158±0.00 0.640±0.39 0.706±0.00 1.322±0.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 TAS negative regulation of transcription from RNA polymerase II promoter
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000012725 Zfp273-002 protein_coding Mus_musculus 0 527
ENSMUST00000181391 Zfp273-001 protein_coding Mus_musculus 0 527
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 0 527
ENSMUST00000167565 Zfp712-201 protein_coding Mus_musculus 0 520
ENSMUST00000190566 Zfp708-002 protein_coding Mus_musculus 0 486
ENSMUST00000109742 Zfp708-001 protein_coding Mus_musculus 0 486
ENSMUST00000109743 RSLCAN18-202 protein_coding Mus_musculus 0 486
ENSMUST00000186303 RSLCAN18-001 nonsense_mediated_decay Mus_musculus 0 486
ENSMUST00000185856 RSLCAN18-004 processed_transcript Mus_musculus 0 486
ENSMUST00000091520 Zfp85-201 protein_coding Mus_musculus 0 424
ENSMUST00000144183 Zfp85-001 protein_coding Mus_musculus 0 424
ENSMUST00000183125 Zfp386-002 protein_coding Mus_musculus 0 390
ENSMUST00000073551 Zfp386-001 protein_coding Mus_musculus 0 390
ENSMUST00000137496 Zfp738-001 protein_coding Mus_musculus 0 374
ENSMUST00000012314 A530054K11Rik-001 protein_coding Mus_musculus 0 363
ENSMUST00000162659 Zfp677-001 protein_coding Mus_musculus 0 283
ENSMUST00000056107 Zfp677-002 protein_coding Mus_musculus 0 283
ENSMUST00000076123 Zfp58-001 protein_coding Mus_musculus 0 278
ENSMUST00000171518 Zfp58-002 protein_coding Mus_musculus 0 278
ENSMUST00000075255 Zfp874a-001 protein_coding Mus_musculus 0 246
ENSMUST00000180580 Zfp874a-002 nonsense_mediated_decay Mus_musculus 0 246
ENSMUST00000092720 5430403G16Rik-001 protein_coding Mus_musculus 0 224
ENSMUST00000163475 2610021A01Rik-001 protein_coding Mus_musculus 0 220
ENSMUST00000012873 AA987161-001 protein_coding Mus_musculus 0 207
ENSMUST00000117110 Zfp455-002 protein_coding Mus_musculus 0 207
ENSMUST00000120861 Zfp455-001 protein_coding Mus_musculus 0 207
ENSMUST00000112544 Gm15446-001 protein_coding Mus_musculus 0 204
ENSMUST00000171257 Gm9894-201 protein_coding Mus_musculus 0 200
ENSMUST00000109732 Zfp429-001 protein_coding Mus_musculus 8.96831e-44 183
ENSMUST00000181071 Zfp429-002 protein_coding Mus_musculus 8.96831e-44 183
ENSMUST00000112536 Zfp932-003 protein_coding Mus_musculus 4.99997e-41 174
ENSMUST00000112540 Zfp932-001 protein_coding Mus_musculus 4.99997e-41 174
ENSMUST00000021997 Rsl1-001 protein_coding Mus_musculus 5e-36 158
ENSMUST00000045969 Zfp458-201 protein_coding Mus_musculus 7e-35 154
ENSMUST00000057070 Zfp456-001 protein_coding Mus_musculus 2e-34 152
ENSMUST00000187241 Zfp932-201 protein_coding Mus_musculus 9e-34 150
ENSMUST00000099449 Zfp808-001 protein_coding Mus_musculus 3e-24 119
ENSMUST00000098509 AW146154-001 protein_coding Mus_musculus 2e-20 106
ENSMUST00000054780 Zfp959-001 protein_coding Mus_musculus 1e-17 97
ENSMUST00000056470 Zfp459-001 protein_coding Mus_musculus 4e-17 95
ENSMUST00000082203 Zfp934-201 protein_coding Mus_musculus 4e-17 95
ENSMUST00000071804 AI987944-001 protein_coding Mus_musculus 2e-16 94
ENSMUST00000101547 Zfp934-202 protein_coding Mus_musculus 2e-16 94
ENSMUST00000189452 Zfp119b-002 protein_coding Mus_musculus 5e-16 92
ENSMUST00000056147 Zfp119b-001 protein_coding Mus_musculus 5e-16 92
ENSMUST00000074369 Zfp825-201 protein_coding Mus_musculus 5e-16 92
ENSMUST00000156218 Zfp938-002 nonsense_mediated_decay Mus_musculus 0.00000000000009 84
ENSMUST00000041264 Zfp938-001 protein_coding Mus_musculus 0.00000000000009 84
ENSMUST00000185656 Zfp287-201 protein_coding Mus_musculus 0.000000000001 81
ENSMUST00000005399 Zfp287-001 protein_coding Mus_musculus 0.000000000001 81
ENSMUST00000149228 Zfp287-002 nonsense_mediated_decay Mus_musculus 0.000000000001 81
ENSMUST00000076195 Zfp935-201 protein_coding Mus_musculus 0.000000000001 81
ENSMUST00000107989 Gm3604-201 protein_coding Mus_musculus 0.000000000004 79
ENSMUST00000187656 Gm3604-001 protein_coding Mus_musculus 0.000000000004 79
ENSMUST00000057241 Zfp874a-003 protein_coding Mus_musculus 0.0000000002 73
ENSMUST00000120832 Gm15182-001 processed_pseudogene Mus_musculus 0.0000000007 71
ENSMUST00000099418 Gm10770-201 protein_coding Mus_musculus 0.00007 55

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