C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuropilin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357118 NRP2-003 ENSG00000118257 9606 + 2:205683260-205777156 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonENST00000357118
Transcript ID Bladder Brain Breast Colon
ENST00000357118 0.246±0.00 0.459±0.00 2.462±0.00 2.001±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001R1 CIL_0001R1_0001 CGP 2:204545793-205798133
CIL_00039J CIL_00039J_0001 CGP 2:205681990-206086303

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005021 IEA vascular endothelial growth factor-activated receptor activity
GO:0007411 IEA axon guidance
GO:0016020 IEA membrane
GO:0017154 IEA semaphorin receptor activity
GO:0038084 IEA vascular endothelial growth factor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114155 Nrp2-004 protein_coding Mus_musculus 0 3696
ENSMUST00000027112 Nrp2-005 protein_coding Mus_musculus 0 3627
ENSMUST00000114157 Nrp2-003 protein_coding Mus_musculus 0 3059
ENSMUST00000075144 Nrp2-006 protein_coding Mus_musculus 0 3059
ENSMUST00000063594 Nrp2-002 protein_coding Mus_musculus 0 3057
ENSMUST00000102822 Nrp2-001 protein_coding Mus_musculus 0 3057
ENSMUST00000126344 Nrp2-007 retained_intron Mus_musculus 0 604

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