C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SRSF protein kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357311 SRPK2-001 ENSG00000135250 9606 - 7:105116377-105269015 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLungMuscleENST00000357311
Transcript ID Brain Colon Lung Muscle
ENST00000357311 21.590±0.00 5.819±0.00 10.203±0.00 3.343±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BG CIL_0005BG_0002 CGP 7:104328656-105114361
CIL_00040Y CIL_00040Y_0001 CGP 7:105014179-105399308
CIL_0005BH CIL_0005BH_0002 CGP 7:105110704-105522267

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000245 IDA spliceosomal complex assembly
GO:0000287 IDA magnesium ion binding
GO:0001525 ISS angiogenesis
GO:0004672 IEA protein kinase activity
GO:0004674 IDA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA:IDA ATP binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006468 IEA:IDA protein phosphorylation
GO:0008284 IDA positive regulation of cell proliferation
GO:0008380 IDA RNA splicing
GO:0010628 ISS positive regulation of gene expression
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0030154 IEA cell differentiation
GO:0035063 ISS nuclear speck organization
GO:0035556 IDA intracellular signal transduction
GO:0043525 ISS positive regulation of neuron apoptotic process
GO:0044822 IDA poly(A) RNA binding
GO:0045070 IDA positive regulation of viral genome replication
GO:0045071 IDA negative regulation of viral genome replication
GO:0045087 IC innate immune response
GO:0045787 ISS positive regulation of cell cycle
GO:0048024 TAS regulation of mRNA splicing, via spliceosome
GO:0071889 ISS 14-3-3 protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088392 Srpk2-201 protein_coding Mus_musculus 0 3663
ENSMUST00000002081 Srpk3-001 protein_coding Mus_musculus 0 309
ENSMUST00000136664 Srpk3-002 retained_intron Mus_musculus 0 241

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