C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear factor I/A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357977 NFIA-008 ENSG00000162599 9606 + 1:61404076-61458037 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverLungOvaryENST00000357977
Transcript ID Bladder Brain Breast Heart Kidney Liver Lung Ovary
ENST00000357977 2.025±0.00 1.524±0.00 4.721±0.00 2.837±0.00 4.346±0.00 6.737±0.00 2.995±0.00 2.469±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OH CIL_0007OH_0001 UCNEbase 1:60234802-61638594
CIL_0007QX CIL_0007QX_0001 VISTA 1:60321185-60922199
CIL_0001NA CIL_0001NA_0001 CGP 1:60865259-61725423

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006260 IEA DNA replication
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092532 Nfia-201 protein_coding Mus_musculus 0 2154
ENSMUST00000052018 Nfia-004 protein_coding Mus_musculus 0 2154
ENSMUST00000107062 Nfia-003 protein_coding Mus_musculus 0 2154
ENSMUST00000107057 Nfia-002 protein_coding Mus_musculus 0 2154
ENSMUST00000075448 Nfia-001 protein_coding Mus_musculus 0 2154
ENSMUST00000148930 Nfia-007 protein_coding Mus_musculus 0 363

Loading