C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358505 KCNN3-003 ENSG00000143603 9606 - 1:154707952-154868319 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryPlacentaTestisENST00000358505
Transcript ID Adrenal Ovary Placenta Testis
ENST00000358505 1.517±0.00 0.771±0.00 0.101±0.02 0.808±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LU CIL_0000LU_0002 CGP 1:154582062-154870280

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005516 IBA:IEA calmodulin binding
GO:0005886 IBA plasma membrane
GO:0006813 IEA potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0015269 IEA calcium-activated potassium channel activity
GO:0016021 IEA integral component of membrane
GO:0016286 IBA:IEA small conductance calcium-activated potassium channel activity
GO:0043025 IBA neuronal cell body
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000811 Kcnn3-001 protein_coding Mus_musculus 0 1746
ENSDART00000088588 kcnn1b-201 protein_coding Danio_rerio 0 752
ENSDART00000132685 kcnn1b-001 protein_coding Danio_rerio 0 752
ENSDART00000142596 kcnn1b-003 protein_coding Danio_rerio 0 693
ENSDART00000141221 KCNN2-001 protein_coding Danio_rerio 0 652
ENSMUST00000124584 Kcnn3-002 retained_intron Mus_musculus 0 466

Loading