C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359165 EEF1A1P4-001 ENSG00000245205 9606 - 12:19456244-19457648 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000359165
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000359165 1.090±0.00 0.913±0.00 0.296±0.00 0.810±0.00 0.901±0.00 0.109±0.00 0.674±0.00 0.232±0.00 0.414±0.00 0.204±0.02 0.127±0.00 0.364±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FL CIL_0005FL_0001 CGP 12:19129752-19720801

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 1594
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 1487
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 1459
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 1384
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 1323
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 1301
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 1219
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 857
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 826
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 728
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 628
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 597
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 542
ENSMUST00000189923 RP23-478L14.1-001 processed_pseudogene Mus_musculus 0 457

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