C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuropilin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360409 NRP2-001 ENSG00000118257 9606 + 2:205682500-205798133 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000360409
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000360409 3.744±0.00 1.075±0.00 1.054±0.00 1.776±0.00 1.754±0.00 0.446±0.00 1.575±1.27 1.056±0.00 5.853±4.50 8.857±5.68 1.274±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001R1 CIL_0001R1_0001 CGP 2:204545793-205798133
CIL_00039J CIL_00039J_0001 CGP 2:205681990-206086303

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0001755 IEA neural crest cell migration
GO:0001764 IEA neuron migration
GO:0005021 IEA vascular endothelial growth factor-activated receptor activity
GO:0005515 IEA protein binding
GO:0007411 IEA axon guidance
GO:0007507 IEA heart development
GO:0016020 IEA membrane
GO:0017154 IEA semaphorin receptor activity
GO:0021612 IEA facial nerve structural organization
GO:0021649 IEA vestibulocochlear nerve structural organization
GO:0021675 IEA nerve development
GO:0021828 IEA gonadotrophin-releasing hormone neuronal migration to the hypothalamus
GO:0030424 IEA axon
GO:0036486 IEA ventral trunk neural crest cell migration
GO:0038084 IEA vascular endothelial growth factor signaling pathway
GO:0048846 IEA axon extension involved in axon guidance
GO:0050919 IEA negative chemotaxis
GO:0061549 IEA sympathetic ganglion development
GO:0061551 IEA trigeminal ganglion development
GO:0061552 IEA ganglion morphogenesis
GO:0097374 IEA sensory neuron axon guidance
GO:0097490 IEA sympathetic neuron projection extension
GO:0097491 IEA sympathetic neuron projection guidance
GO:1901166 IEA neural crest cell migration involved in autonomic nervous system development
GO:1902285 IEA semaphorin-plexin signaling pathway involved in neuron projection guidance
GO:1903375 IEA facioacoustic ganglion development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114157 Nrp2-003 protein_coding Mus_musculus 0 4386
ENSMUST00000063594 Nrp2-002 protein_coding Mus_musculus 0 4294
ENSMUST00000075144 Nrp2-006 protein_coding Mus_musculus 0 3674
ENSMUST00000102822 Nrp2-001 protein_coding Mus_musculus 0 3653
ENSMUST00000027112 Nrp2-005 protein_coding Mus_musculus 0 3446
ENSMUST00000114155 Nrp2-004 protein_coding Mus_musculus 0 3426
ENSMUST00000126344 Nrp2-007 retained_intron Mus_musculus 0 1199

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