| Transcript ID | Lung |
|---|---|
| ENST00000361242 | 0.487±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | autophagy related 9A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000361242  |
ATG9A-003 |
ENSG00000198925 |
9606 | - |
2:219220054-219229670  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000916 | CIL_000916_0001 | VISTA | 2:219106772-219707284 |
| CIL_0006EB | CIL_0006EB_0001 | CGP | 2:219195237-219218990 |
| CIL_0006EA | CIL_0006EA_0001 | CGP | 2:219209768-219229717 |
| CIL_0006EI | CIL_0006EI_0001 | CGP | 2:219209772-219236669 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000045 | IMP | autophagic vacuole assembly |
| GO:0000407 | IBA | pre-autophagosomal structure |
| GO:0000422 | IBA | mitochondrion degradation |
| GO:0005515 | IPI | protein binding |
| GO:0005768 | IDA | endosome |
| GO:0005770 | IDA | late endosome |
| GO:0005776 | IBA | autophagic vacuole |
| GO:0005783 | IEA | endoplasmic reticulum |
| GO:0005802 | IDA | trans-Golgi network |
| GO:0015002 | IEA | heme-copper terminal oxidase activity |
| GO:0015031 | IEA | protein transport |
| GO:0016020 | IDA:IEA | membrane |
| GO:0016021 | IBA | integral component of membrane |
| GO:0031410 | IEA | cytoplasmic vesicle |
| GO:0034497 | IBA | protein localization to pre-autophagosomal structure |
| GO:0034727 | IBA | piecemeal microautophagy of nucleus |
| GO:0044805 | IBA | late nucleophagy |
| GO:0055037 | IDA | recycling endosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000040689
|
Atg9a-201 | protein_coding | Mus_musculus | 0 | 3849 |
|
ENSMUST00000188347
|
Atg9a-001 | protein_coding | Mus_musculus | 0 | 3849 |
|
ENSMUST00000189702
|
Atg9a-002 | protein_coding | Mus_musculus | 0 | 3849 |
|
ENSMUST00000189820
|
Atg9a-005 | protein_coding | Mus_musculus | 0 | 3415 |
|
ENSMUST00000189665
|
Atg9a-003 | nonsense_mediated_decay | Mus_musculus | 0 | 3013 |
|
ENSMUST00000187785
|
Atg9a-008 | protein_coding | Mus_musculus | 0 | 913 |
|
ENSMUST00000188430
|
Atg9a-004 | retained_intron | Mus_musculus | 0 | 839 |
|
ENSMUST00000187601
|
Atg9a-007 | retained_intron | Mus_musculus | 0 | 285 |
|
ENSMUST00000186744
|
Atg9a-006 | protein_coding | Mus_musculus | 0 | 276 |
