C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: listerin E3 ubiquitin protein ligase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361371 LTN1-008 ENSG00000198862 9606 - 21:28928144-28992885 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000361371
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000361371 2.305±0.00 0.413±0.00 1.577±0.00 3.063±1.14 2.374±0.83 1.226±0.01 2.050±0.02 2.007±0.84 2.847±2.42 2.024±1.05 1.860±1.15 2.103±2.51 0.765±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XV CIL_0002XV_0001 CGP 21:28872191-28992956
CIL_0006DO CIL_0006DO_0001 CGP 21:28928144-29019378

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039449 Ltn1-201 protein_coding Mus_musculus 0 5156

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