C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: astrotactin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361833 ASTN1-001 ENSG00000152092 9606 - 1:176861067-177164690 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361833
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361833 0.125±0.00 0.088±0.00 17.487±3.02 0.049±0.00 0.455±0.00 0.132±0.00 0.029±0.00 0.032±0.00 0.120±0.04 0.069±0.00 1.999±1.89 0.124±0.06 0.337±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IEA neuron migration
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005768 IEA endosome
GO:0007158 IEA neuron cell-cell adhesion
GO:0007626 IEA locomotory behavior
GO:0009897 IEA external side of plasma membrane
GO:0016021 IEA integral component of membrane
GO:0016337 IEA single organismal cell-cell adhesion
GO:0016477 IEA cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046110 Astn1-201 protein_coding Mus_musculus 0 5334
ENSMUST00000170718 Astn1-202 protein_coding Mus_musculus 0 3291
ENSDART00000077216 astn1-201 protein_coding Danio_rerio 0 1168
ENSDART00000145451 astn1-001 protein_coding Danio_rerio 0 793
ENSDART00000141796 astn1-003 protein_coding Danio_rerio 0 302
ENSDART00000134926 astn1-002 protein_coding Danio_rerio 0 302
ENSMUST00000084496 Astn2-201 protein_coding Mus_musculus 2e-18 100
ENSMUST00000068214 Astn2-001 protein_coding Mus_musculus 2e-18 100

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