C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jade family PHD finger 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361895 JADE2-001 ENSG00000043143 9606 + 5:134525673-134579814 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLiverLungMuscleOvaryENST00000361895
Transcript ID Colon Heart Liver Lung Muscle Ovary
ENST00000361895 0.513±0.00 0.745±0.00 1.278±0.00 2.037±0.00 0.840±0.00 2.285±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089W CIL_00089W_0001 VISTA 5:134136326-134739629
CIL_0007JT CIL_0007JT_0001 UCNEbase 5:134390519-134524544
CIL_00062U CIL_00062U_0002 CGP 5:134402087-134583230

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000123 IDA histone acetyltransferase complex
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding
GO:0043966 IDA histone H3 acetylation
GO:0043981 IDA histone H4-K5 acetylation
GO:0043982 IDA histone H4-K8 acetylation
GO:0043983 IDA histone H4-K12 acetylation
GO:0060395 IEA SMAD protein signal transduction
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109090 Jade2-002 protein_coding Mus_musculus 0 2425
ENSMUST00000020655 Jade2-001 protein_coding Mus_musculus 0 2425
ENSMUST00000109091 Jade2-004 protein_coding Mus_musculus 0 1997
ENSDART00000075432 JADE2-201 protein_coding Danio_rerio 0 472
ENSDART00000151773 JADE2-001 protein_coding Danio_rerio 0 472
ENSMUST00000151277 Jade2-003 processed_transcript Mus_musculus 0 222

Loading