C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear factor, erythroid 2-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000362042 NFE2L1-001 ENSG00000082641 9606 + 17:48048359-48061480 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000362042
Transcript ID Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000362042 15.186±0.00 9.902±0.00 3.143±0.00 15.267±0.00 11.894±8.74 35.422±31.79 7.861±0.86 6.478±1.96 13.743±9.14 24.273±10.47 22.358±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RQ CIL_0007RQ_0001 VISTA 17:47700006-48306250
CIL_0007WA CIL_0007WA_0001 VISTA 17:47751636-48352675
CIL_00097B CIL_00097B_0001 VISTA 17:47849190-48450331
CIL_0004MY CIL_0004MY_0002 CGP 17:48048329-48101521

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000980 IEA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001190 IEA RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription
GO:0001205 IEA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003712 TAS transcription cofactor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006783 TAS heme biosynthetic process
GO:0006954 TAS inflammatory response
GO:0009653 TAS anatomical structure morphogenesis
GO:0016021 IEA integral component of membrane
GO:0030218 IEA erythrocyte differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167149 Nfe2l1-203 protein_coding Mus_musculus 0 1989
ENSMUST00000081775 Nfe2l1-201 protein_coding Mus_musculus 0 1989
ENSMUST00000167110 Nfe2l1-202 protein_coding Mus_musculus 0 1989
ENSMUST00000169828 Nfe2l1-204 protein_coding Mus_musculus 0 1989
ENSMUST00000107657 Nfe2l1-002 protein_coding Mus_musculus 0 1989
ENSMUST00000107658 Nfe2l1-001 protein_coding Mus_musculus 0 1989
ENSMUST00000107659 Nfe2l1-008 protein_coding Mus_musculus 0 1578
ENSMUST00000126949 Nfe2l1-005 protein_coding Mus_musculus 0 754
ENSMUST00000135836 Nfe2l1-003 processed_transcript Mus_musculus 0 357
ENSMUST00000134951 Nfe2l1-007 processed_transcript Mus_musculus 0 305
ENSMUST00000142065 Nfe2l1-006 protein_coding Mus_musculus 0 303
ENSMUST00000140138 Nfe2l1-004 processed_transcript Mus_musculus 1e-38 167
ENSDART00000126147 nfe2l2a-201 protein_coding Danio_rerio 2e-25 122
ENSDART00000062854 nfe2l2a-001 protein_coding Danio_rerio 2e-25 122

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