C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycoprotein Ib (platelet), beta polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366425 GP1BB-001 ENSG00000203618 9606 + 22:19722945-19724771 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverLungMuscleENST00000366425
Transcript ID Adipose Adrenal Breast Colon Liver Lung Muscle
ENST00000366425 2.276±0.00 18.581±0.00 5.895±0.00 5.363±0.00 0.420±0.00 10.022±0.00 1.565±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BW CIL_0008BW_0001 VISTA 22:19453681-20054184
CIL_00099J CIL_00099J_0001 VISTA 22:19461833-20062532
CIL_00095F CIL_00095F_0001 VISTA 22:19497462-20100487

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004888 NAS transmembrane signaling receptor activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0005887 NAS integral component of plasma membrane
GO:0007155 IEA cell adhesion
GO:0007166 NAS cell surface receptor signaling pathway
GO:0007596 TAS blood coagulation
GO:0007597 TAS blood coagulation, intrinsic pathway
GO:0030168 NAS platelet activation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167388 Gp1bb-202 protein_coding Mus_musculus 0 760
ENSMUST00000051160 Gp1bb-201 protein_coding Mus_musculus 0 582
ENSMUST00000096987 Sept5-201 protein_coding Mus_musculus 7e-31 139

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