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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | H3 histone, family 3A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000366814  |
H3F3A-003 |
ENSG00000163041 |
9606 | + |
1:226062714-226067269  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007R5 | CIL_0007R5_0001 | VISTA | 1:225466688-226068183 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000786 | IEA | nucleosome |
| GO:0003677 | IEA | DNA binding |
| GO:0005634 | IEA | nucleus |
| GO:0046982 | IEA | protein heterodimerization activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000159441
|
H3f3a-005 | retained_intron | Mus_musculus | 0 | 678 |
|
ENSMUST00000161308
|
H3f3a-001 | protein_coding | Mus_musculus | 0 | 636 |
|
ENSMUST00000162814
|
H3f3a-003 | protein_coding | Mus_musculus | 0 | 601 |
|
ENSMUST00000081026
|
H3f3a-006 | protein_coding | Mus_musculus | 0 | 601 |
|
ENSMUST00000159789
|
H3f3a-007 | protein_coding | Mus_musculus | 0 | 484 |
|
ENSMUST00000119544
|
H3f3a-ps2-001 | processed_pseudogene | Mus_musculus | 0 | 457 |
|
ENSMUST00000119546
|
H3f3a-ps1-001 | processed_pseudogene | Mus_musculus | 0 | 451 |
|
ENSMUST00000179671
|
Gm10257-201 | processed_pseudogene | Mus_musculus | 0 | 446 |
|
ENSMUST00000077016
|
Gm6421-201 | processed_pseudogene | Mus_musculus | 0 | 442 |
|
ENSMUST00000119560
|
Gm12657-001 | processed_pseudogene | Mus_musculus | 0 | 440 |
|
ENSMUST00000119459
|
H3f3c-001 | processed_pseudogene | Mus_musculus | 0 | 440 |
|
ENSMUST00000179566
|
Gm6132-201 | processed_pseudogene | Mus_musculus | 0 | 412 |
|
ENSMUST00000121118
|
Gm13529-001 | processed_pseudogene | Mus_musculus | 0 | 411 |
|
ENSMUST00000120752
|
Gm3835-001 | processed_pseudogene | Mus_musculus | 0 | 405 |
|
ENSMUST00000169993
|
Gm17136-001 | processed_pseudogene | Mus_musculus | 0 | 401 |
|
ENSMUST00000183321
|
Gm26980-001 | processed_pseudogene | Mus_musculus | 0 | 363 |
|
ENSMUST00000179046
|
Gm7426-201 | pseudogene | Mus_musculus | 0 | 357 |
|
ENSMUST00000120136
|
Gm15763-001 | processed_pseudogene | Mus_musculus | 0 | 355 |
|
ENSMUST00000117894
|
Gm14529-001 | processed_pseudogene | Mus_musculus | 0 | 351 |
|
ENSMUST00000121719
|
Gm12271-001 | processed_pseudogene | Mus_musculus | 0 | 351 |
|
ENSMUST00000186232
|
RP23-128A11.4-001 | processed_pseudogene | Mus_musculus | 0 | 320 |
|
ENSMUST00000116640
|
Gm14807-001 | processed_pseudogene | Mus_musculus | 0 | 318 |
|
ENSMUST00000118617
|
Gm12513-001 | processed_pseudogene | Mus_musculus | 0 | 316 |
|
ENSMUST00000162118
|
H3f3a-002 | protein_coding | Mus_musculus | 0 | 307 |
|
ENSMUST00000121637
|
Gm14383-001 | processed_pseudogene | Mus_musculus | 0 | 300 |
|
ENSMUST00000159685
|
H3f3a-004 | protein_coding | Mus_musculus | 0 | 298 |
|
ENSMUST00000120730
|
Gm15220-001 | processed_pseudogene | Mus_musculus | 0 | 255 |
|
ENSMUST00000118841
|
Gm14669-001 | processed_pseudogene | Mus_musculus | 0 | 224 |
|
ENSMUST00000119660
|
Gm8757-001 | processed_pseudogene | Mus_musculus | 0 | 224 |
|
ENSMUST00000119709
|
Gm14937-001 | processed_pseudogene | Mus_musculus | 0 | 191 |
