C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-rich coiled-coil 2C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367742 PRRC2C-001 ENSG00000117523 9606 + 1:171485551-171593511 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000367742
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000367742 6.228±0.00 3.499±0.67 6.294±0.00 2.742±0.00 2.729±0.00 0.991±0.00 3.336±2.39 2.943±1.46 6.824±3.28 5.566±3.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X5 CIL_0007X5_0001 VISTA 1:170981906-171584837

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028016 Prrc2c-006 protein_coding Mus_musculus 0 3518
ENSMUST00000182593 Prrc2c-005 protein_coding Mus_musculus 0 3518
ENSMUST00000182660 Prrc2c-004 protein_coding Mus_musculus 0 3518
ENSMUST00000182149 Prrc2c-001 protein_coding Mus_musculus 0 3518
ENSMUST00000182393 Prrc2c-003 protein_coding Mus_musculus 0 2922
ENSMUST00000183223 Prrc2c-009 protein_coding Mus_musculus 0 2241
ENSMUST00000183011 Prrc2c-008 protein_coding Mus_musculus 0 1899
ENSMUST00000182288 Prrc2c-007 retained_intron Mus_musculus 0 854
ENSMUST00000182331 Prrc2c-011 protein_coding Mus_musculus 0 652
ENSMUST00000182308 Prrc2c-012 retained_intron Mus_musculus 0 472
ENSMUST00000182535 Prrc2c-013 retained_intron Mus_musculus 0 374

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