C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lamin A/C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368297 LMNA-007 ENSG00000160789 9606 + 1:156126189-156137865 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyOvaryTestisENST00000368297
Transcript ID Brain Breast Colon Heart Kidney Ovary Testis
ENST00000368297 1.981±0.00 7.428±0.00 12.425±0.00 4.564±0.00 4.881±0.00 67.694±41.53 11.431±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036252 Lmna-003 protein_coding Mus_musculus 0 1768
ENSMUST00000120377 Lmna-002 protein_coding Mus_musculus 0 1768
ENSMUST00000029699 Lmna-001 protein_coding Mus_musculus 0 1683
ENSMUST00000147537 Lmna-006 retained_intron Mus_musculus 0 473
ENSMUST00000135494 Lmna-005 processed_transcript Mus_musculus 0 342

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