C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquilin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368309 UBQLN4-001 ENSG00000160803 9606 - 1:156035301-156053794 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000368309
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000368309 7.820±0.00 2.650±0.00 0.755±0.00 8.234±2.86 4.348±1.19 5.568±4.80 4.047±2.89 4.265±2.28 2.767±1.54 5.641±4.34 10.596±6.59 16.246±13.76 8.566±2.12 10.114±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003684 IEA damaged DNA binding
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005789 ISS endoplasmic reticulum membrane
GO:0005813 IDA centrosome
GO:0005829 ISS cytosol
GO:0006289 IEA nucleotide-excision repair
GO:0031593 IDA polyubiquitin binding
GO:0031595 IDA nuclear proteasome complex
GO:0031597 IDA cytosolic proteasome complex
GO:0032434 IMP regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042802 IPI identical protein binding
GO:0043161 IEA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000008748 Ubqln4-201 protein_coding Mus_musculus 0 2385

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