C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenosylmethionine decarboxylase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368882 AMD1-201 ENSG00000123505 9606 + 6:110874784-110895708 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverLungMuscleOvaryTestisENST00000368882
Transcript ID Colon Liver Lung Muscle Ovary Testis
ENST00000368882 4.078±0.00 3.736±0.00 3.827±1.32 1.580±0.00 4.025±0.00 4.020±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OV CIL_0001OV_0002 CGP 6:110609978-110895713

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004014 IEA adenosylmethionine decarboxylase activity
GO:0006597 IEA spermine biosynthetic process
GO:0008295 IEA spermidine biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080898 Amd2-201 protein_coding Mus_musculus 0 1568
ENSMUST00000099945 Amd1-201 protein_coding Mus_musculus 0 1557
ENSMUST00000072796 Amd-ps3-201 processed_pseudogene Mus_musculus 0 1066
ENSMUST00000118392 Amd-ps4-001 processed_pseudogene Mus_musculus 0 880
ENSMUST00000120127 Amd-ps1-001 processed_pseudogene Mus_musculus 0 808

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