C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC63 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369002 SEC63-001 ENSG00000025796 9606 - 6:107867756-107958189 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369002
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369002 7.188±0.00 5.500±0.00 0.596±0.00 5.325±0.00 4.057±3.33 3.950±2.87 4.180±0.00 6.138±0.00 1.715±0.61 3.738±1.37 2.468±0.00 7.808±3.92 2.431±1.02 8.967±1.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KA CIL_0007KA_0001 UCNEbase 6:107632412-108443377
CIL_0008G4 CIL_0008G4_0001 VISTA 6:107814126-108415302
CIL_0009BP CIL_0009BP_0001 VISTA 6:107816039-108417248

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001889 IEA liver development
GO:0004872 TAS receptor activity
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005783 IEA endoplasmic reticulum
GO:0006612 TAS protein targeting to membrane
GO:0006614 IMP SRP-dependent cotranslational protein targeting to membrane
GO:0006620 IMP posttranslational protein targeting to membrane
GO:0006807 IEA nitrogen compound metabolic process
GO:0008565 IEA protein transporter activity
GO:0010259 IEA multicellular organismal aging
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0031204 IEA posttranslational protein targeting to membrane, translocation
GO:0044822 IDA poly(A) RNA binding
GO:0072001 IEA renal system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019937 Sec63-001 protein_coding Mus_musculus 0 3792
ENSMUST00000155410 Sec63-002 retained_intron Mus_musculus 0 2793
ENSMUST00000144228 Sec63-003 retained_intron Mus_musculus 0 1254
ENSMUST00000105496 Sec63-005 processed_transcript Mus_musculus 0 520
ENSMUST00000124613 Sec63-004 processed_transcript Mus_musculus 0 514
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0001 55

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