C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sex comb on midleg-like 4 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369022 SCML4-008 ENSG00000146285 9606 - 6:107704104-107824317 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000369022
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000369022 0.020±0.00 1.932±0.00 0.075±0.00 0.356±0.00 0.219±0.04 0.034±0.02 0.085±0.00 0.042±0.00 0.701±0.04 0.184±0.03 0.054±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KA CIL_0007KA_0001 UCNEbase 6:107632412-108443377

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105494 Scml4-003 protein_coding Mus_musculus 0 874
ENSMUST00000063063 Scml4-002 protein_coding Mus_musculus 0 835
ENSMUST00000130511 Scml4-004 retained_intron Mus_musculus 0 542
ENSMUST00000127675 Scml4-006 processed_transcript Mus_musculus 0 403

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