C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 2, H2be
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369155 HIST2H2BE-001 ENSG00000184678 9606 - 1:149884459-149886652 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369155
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369155 1.092±0.00 8.504±0.00 2.412±0.00 7.530±3.45 3.502±1.60 4.117±1.99 12.808±8.39 6.754±0.00 2.078±0.52 9.845±5.66 8.616±3.05 3.903±2.17 8.746±3.55 4.465±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UD CIL_0000UD_0004 CGP 1:149842188-149886652
CIL_0000UC CIL_0000UC_0005 CGP 1:149842204-149886652

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 NAS:IEA nucleosome
GO:0002227 IDA innate immune response in mucosa
GO:0003677 NAS:IEA DNA binding
GO:0005615 IDA extracellular space
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 NAS nucleosome assembly
GO:0019731 IDA antibacterial humoral response
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0050830 IDA defense response to Gram-positive bacterium
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091709 Hist1h2bn-001 protein_coding Mus_musculus 0 549
ENSMUST00000105106 Hist1h2bf-001 protein_coding Mus_musculus 0 549
ENSMUST00000051091 Hist1h2be-001 protein_coding Mus_musculus 0 547
ENSMUST00000091704 Hist1h2be-002 protein_coding Mus_musculus 0 547
ENSMUST00000091756 Hist1h2bl-001 protein_coding Mus_musculus 0 544
ENSMUST00000079251 Hist1h2bg-001 protein_coding Mus_musculus 0 544
ENSMUST00000110467 Hist1h2br-001 protein_coding Mus_musculus 0 542
ENSMUST00000018246 Hist1h2bc-001 protein_coding Mus_musculus 0 542
ENSMUST00000110469 Hist1h2bq-001 protein_coding Mus_musculus 0 542
ENSMUST00000078156 Hist1h2bh-001 protein_coding Mus_musculus 0 536
ENSMUST00000180288 Hist1h2br-201 protein_coding Mus_musculus 0 534
ENSMUST00000091749 Hist1h2bq-201 protein_coding Mus_musculus 0 534
ENSMUST00000110476 Hist1h2bm-001 protein_coding Mus_musculus 0 532
ENSMUST00000110452 Hist1h2bj-001 protein_coding Mus_musculus 0 529
ENSMUST00000110455 Hist1h2bk-001 protein_coding Mus_musculus 0 527
ENSMUST00000102982 Hist1h2bp-001 protein_coding Mus_musculus 0 521
ENSMUST00000110473 Hist1h2bp-002 protein_coding Mus_musculus 0 510
ENSMUST00000078267 Hist3h2ba-001 protein_coding Mus_musculus 0 484
ENSMUST00000099703 Hist1h2bb-001 protein_coding Mus_musculus 0 484
ENSMUST00000117558 Hist3h2bb-ps-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000090781 Hist2h2be-001 protein_coding Mus_musculus 0 466
ENSDART00000124016 zgc:112234-205 protein_coding Danio_rerio 0 429
ENSDART00000128030 zgc:112234-204 protein_coding Danio_rerio 0 424
ENSMUST00000052776 Hist1h2ba-001 protein_coding Mus_musculus 0 416
ENSDART00000109316 zgc:112234-202 protein_coding Danio_rerio 0 414
ENSDART00000123136 zgc:112234-203 protein_coding Danio_rerio 0 412
ENSDART00000152735 zgc:171759-001 protein_coding Danio_rerio 0 394
ENSDART00000109751 protein_coding Danio_rerio 0 392
ENSDART00000115210 ano9a-001 protein_coding Danio_rerio 0 392
ENSDART00000114598 ano9a-001 protein_coding Danio_rerio 0 390
ENSDART00000152761 zgc:171759-001 protein_coding Danio_rerio 0 379
ENSDART00000114942 zgc:171759-204 protein_coding Danio_rerio 0 379
ENSDART00000152449 zgc:171759-001 protein_coding Danio_rerio 0 379
ENSDART00000146977 zgc:171759-209 protein_coding Danio_rerio 0 375
ENSDART00000057788 zgc:171759-202 protein_coding Danio_rerio 0 375
ENSDART00000152388 zgc:171759-001 protein_coding Danio_rerio 0 374
ENSDART00000156838 ano9a-001 protein_coding Danio_rerio 0 374
ENSDART00000103017 zgc:171759-203 protein_coding Danio_rerio 0 370
ENSDART00000129255 ano9a-201 protein_coding Danio_rerio 0 370
ENSDART00000156508 zgc:173587-001 protein_coding Danio_rerio 0 368
ENSDART00000111053 zgc:171759-206 protein_coding Danio_rerio 0 368
ENSDART00000126590 zgc:173587-201 protein_coding Danio_rerio 0 364
ENSDART00000130784 zgc:173587-202 protein_coding Danio_rerio 0 364
ENSDART00000154655 zgc:171759-001 protein_coding Danio_rerio 0 363
ENSDART00000157137 si:dkey-261m9.19-001 protein_coding Danio_rerio 0 363
ENSDART00000102959 si:dkey-261m9.19-201 protein_coding Danio_rerio 0 361
ENSDART00000146289 zgc:171759-208 protein_coding Danio_rerio 0 359
ENSDART00000155850 zgc:171759-001 protein_coding Danio_rerio 0 357
ENSDART00000050237 zgc:171759-201 protein_coding Danio_rerio 0 353
ENSDART00000073457 zgc:194989-001 protein_coding Danio_rerio 0 351
ENSDART00000145370 wu:fe11b02-207 protein_coding Danio_rerio 0 346
ENSDART00000136970 zgc:171759-210 protein_coding Danio_rerio 0 342
ENSDART00000113626 zgc:171759-205 protein_coding Danio_rerio 0 342
ENSDART00000154377 si:dkey-261m9.6-001 protein_coding Danio_rerio 0 335
ENSDART00000145542 si:dkey-261m9.6-201 protein_coding Danio_rerio 0 331
ENSDART00000126724 wu:fe11b02-206 protein_coding Danio_rerio 0 326
ENSDART00000143021 wu:fe11b02-208 protein_coding Danio_rerio 0 324
ENSDART00000123848 wu:fe11b02-205 protein_coding Danio_rerio 0 322
ENSDART00000122306 wu:fe11b02-204 protein_coding Danio_rerio 0 320
ENSDART00000114327 wu:fe11b02-201 protein_coding Danio_rerio 0 318
ENSDART00000143995 si:ch211-190p8.2-001 protein_coding Danio_rerio 0 217
ENSDART00000105575 zgc:92591-201 protein_coding Danio_rerio 0 211

Loading