C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cannabinoid receptor 1 (brain)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369501 CNR1-001 ENSG00000118432 9606 - 6:88139864-88166359 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000369501
Transcript ID Adipose Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000369501 14.208±0.00 2.912±0.83 0.390±0.00 5.300±0.00 0.178±0.00 0.291±0.00 0.344±0.00 0.210±0.00 0.891±0.80 1.112±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BR CIL_0006BR_0002 CGP 6:88139864-88963596

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002866 IEA positive regulation of acute inflammatory response to antigenic stimulus
GO:0004930 IEA G-protein coupled receptor activity
GO:0004949 IDA:IEA cannabinoid receptor activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007187 TAS G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger
GO:0007188 IDA adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007283 IEA spermatogenesis
GO:0007413 IEA axonal fasciculation
GO:0007568 IEA aging
GO:0007584 IEA response to nutrient
GO:0007611 IEA learning or memory
GO:0007613 IEA memory
GO:0008144 IEA drug binding
GO:0010976 IEA positive regulation of neuron projection development
GO:0016021 IEA integral component of membrane
GO:0019216 IEA regulation of lipid metabolic process
GO:0019233 IEA sensory perception of pain
GO:0030424 IEA axon
GO:0030426 IEA growth cone
GO:0031622 IEA positive regulation of fever generation
GO:0031999 IEA negative regulation of fatty acid beta-oxidation
GO:0032228 IEA regulation of synaptic transmission, GABAergic
GO:0032496 IEA response to lipopolysaccharide
GO:0033004 IEA negative regulation of mast cell activation
GO:0033602 IEA negative regulation of dopamine secretion
GO:0035094 IEA response to nicotine
GO:0042220 IEA response to cocaine
GO:0042593 IEA glucose homeostasis
GO:0043065 IEA positive regulation of apoptotic process
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043271 IEA negative regulation of ion transport
GO:0043278 IEA response to morphine
GO:0045471 IEA response to ethanol
GO:0045759 IEA negative regulation of action potential
GO:0045776 IEA negative regulation of blood pressure
GO:0045777 IEA positive regulation of blood pressure
GO:0050796 IEA regulation of insulin secretion
GO:0051001 IEA negative regulation of nitric-oxide synthase activity
GO:0051966 IEA regulation of synaptic transmission, glutamatergic
GO:0060135 IEA maternal process involved in female pregnancy
GO:0060259 IEA regulation of feeding behavior
GO:0060405 IEA regulation of penile erection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057188 Cnr1-001 protein_coding Mus_musculus 0 2728
ENSMUST00000084736 Cnr1-003 protein_coding Mus_musculus 0 2468
ENSMUST00000133462 Cnr1-002 processed_transcript Mus_musculus 0 272

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