C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-cell leukemia homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370196 TLX1-001 ENSG00000107807 9606 + 10:101130505-101137789 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyOvaryPlacentaTestisENST00000370196
Transcript ID Kidney Ovary Placenta Testis
ENST00000370196 0.076±0.00 1.011±0.45 0.063±0.01 0.127±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000940 CIL_000940_0001 VISTA 10:100919065-101519843
CIL_0007ZR CIL_0007ZR_0001 VISTA 10:101034855-101635629
CIL_0001C6 CIL_0001C6_0002 CGP 10:101130505-101229794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0007417 IEA central nervous system development
GO:0008284 IEA positive regulation of cell proliferation
GO:0030182 IEA neuron differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0045165 IEA cell fate commitment
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity
GO:0048536 IEA spleen development
GO:0048645 IEA organ formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026236 Tlx1-001 protein_coding Mus_musculus 0 1483
ENSMUST00000174617 Tlx1-002 protein_coding Mus_musculus 0 610
ENSDART00000026025 CABZ01067175.1-201 protein_coding Danio_rerio 0 244

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