C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BEN domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370746 BEND6-004 ENSG00000151917 9606 + 6:56955292-57027342 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000370746
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000370746 0.156±0.00 0.431±0.00 10.953±1.41 0.508±0.00 0.228±0.20 0.080±0.06 0.551±0.00 0.091±0.07 0.183±0.00 0.868±0.39 0.244±0.11 0.396±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087X CIL_00087X_0001 VISTA 6:56568098-57176485

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0001106 IGI RNA polymerase II transcription corepressor activity
GO:0003682 IEA chromatin binding
GO:0005634 IEA nucleus
GO:0045666 IEA positive regulation of neuron differentiation
GO:0045746 IEA negative regulation of Notch signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062289 Bend6-001 protein_coding Mus_musculus 0 795
ENSMUST00000126724 Bend6-004 protein_coding Mus_musculus 0 726
ENSMUST00000115161 Bend6-003 protein_coding Mus_musculus 0 673
ENSMUST00000129464 Bend6-002 protein_coding Mus_musculus 0.000000000000001 90

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