C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, alpha type, 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370873 PSMA7-001 ENSG00000101182 9606 - 20:62136735-62143430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370873
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370873 113.366±0.00 84.844±0.00 5.756±0.00 37.719±9.34 61.059±36.17 59.239±43.58 46.426±30.90 62.444±42.55 54.485±35.45 45.154±31.50 132.330±96.77 107.497±44.98 101.138±22.63 41.677±23.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001DO CIL_0001DO_0001 CGP 20:62122461-62143440
CIL_000134 CIL_000134_0001 CGP 20:62136735-62182484

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029082 Psma7-001 protein_coding Mus_musculus 0 1020
ENSMUST00000126021 Psma7-002 retained_intron Mus_musculus 0 852
ENSMUST00000132431 Psma7-004 retained_intron Mus_musculus 0 494
ENSDART00000015479 psma8-201 protein_coding Danio_rerio 0 405
ENSMUST00000142042 Psma7-005 retained_intron Mus_musculus 0 315
ENSMUST00000155898 Psma7-003 processed_transcript Mus_musculus 0 309
ENSMUST00000129529 Psma7-007 retained_intron Mus_musculus 1e-32 145

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