C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 280C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370978 ZNF280C-001 ENSG00000056277 9606 - X:130202711-130268899 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370978
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370978 0.248±0.00 0.651±0.00 0.264±0.00 0.236±0.02 0.117±0.06 0.219±0.00 0.369±0.27 0.189±0.05 0.652±0.00 0.194±0.00 0.866±0.49 0.236±0.14 5.136±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SX CIL_0000SX_0001 CGP X:130171649-130268899
CIL_0000SW CIL_0000SW_0001 CGP X:130202711-130373361

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072292 Zfp280c-002 protein_coding Mus_musculus 0 1578
ENSMUST00000088898 Zfp280c-004 protein_coding Mus_musculus 0 1570
ENSMUST00000076635 Zfp280c-001 protein_coding Mus_musculus 0 1570
ENSMUST00000114940 Zfp280c-003 protein_coding Mus_musculus 0 1247
ENSMUST00000183410 Zfp280d-020 protein_coding Mus_musculus 0 985
ENSMUST00000098576 Zfp280d-011 protein_coding Mus_musculus 0 985
ENSMUST00000184517 Zfp280d-003 protein_coding Mus_musculus 0 985
ENSMUST00000184036 Zfp280d-001 protein_coding Mus_musculus 0 972
ENSMUST00000183801 Zfp280d-021 nonsense_mediated_decay Mus_musculus 0 929
ENSMUST00000184053 Zfp280d-010 nonsense_mediated_decay Mus_musculus 0 725
ENSMUST00000184399 Zfp280d-002 nonsense_mediated_decay Mus_musculus 0 725
ENSMUST00000185020 Zfp280d-007 nonsense_mediated_decay Mus_musculus 0 496
ENSMUST00000184786 Zfp280d-006 nonsense_mediated_decay Mus_musculus 0 379
ENSMUST00000183400 Zfp280d-012 retained_intron Mus_musculus 3.9937e-43 182
ENSMUST00000143028 Zfp280c-007 retained_intron Mus_musculus 4.99983e-42 178

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