C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy related 4C, cysteine peptidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371118 ATG4C-004 ENSG00000125703 9606 + 1:62785233-62819179 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLungENST00000371118
Transcript ID Heart Lung
ENST00000371118 0.636±0.00 0.927±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002G5 CIL_0002G5_0001 CGP 1:62597487-62865513
CIL_0008H9 CIL_0008H9_0001 VISTA 1:62603678-63205223
CIL_00085L CIL_00085L_0001 VISTA 1:62677863-63279213
CIL_00089A CIL_00089A_0001 VISTA 1:62698611-63300046

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0006508 IEA proteolysis
GO:0006914 IEA autophagy
GO:0008234 IEA cysteine-type peptidase activity
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180278 Atg4c-201 protein_coding Mus_musculus 0 713
ENSMUST00000030279 Atg4c-001 protein_coding Mus_musculus 0 713

Loading