C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nuclear factor I/A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371191 NFIA-002 ENSG00000162599 9606 + 1:60865259-61455525 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OH CIL_0007OH_0001 UCNEbase 1:60234802-61638594
CIL_0007QX CIL_0007QX_0001 VISTA 1:60321185-60922199
CIL_0001NA CIL_0001NA_0001 CGP 1:60865259-61725423

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006260 IEA DNA replication
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075448 Nfia-001 protein_coding Mus_musculus 0 2564
ENSMUST00000107062 Nfia-003 protein_coding Mus_musculus 0 2073
ENSMUST00000052018 Nfia-004 protein_coding Mus_musculus 0 1681
ENSMUST00000092532 Nfia-201 protein_coding Mus_musculus 0 1378
ENSMUST00000107057 Nfia-002 protein_coding Mus_musculus 0 1192
ENSMUST00000148930 Nfia-007 protein_coding Mus_musculus 0 1173
ENSMUST00000152023 Nfia-005 protein_coding Mus_musculus 0 1007
ENSMUST00000133011 Nfia-006 processed_transcript Mus_musculus 0 811
ENSDART00000138382 nfia-002 protein_coding Danio_rerio 0 671

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