C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hook microtubule-tethering protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371208 HOOK1-001 ENSG00000134709 9606 + 1:59814861-59876378 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverLungOvaryPlacentaTestisENST00000371208
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENST00000371208 0.006±0.00 0.246±0.00 1.319±0.32 0.349±0.00 4.717±0.00 0.433±0.18 1.115±0.00 0.937±0.53 0.637±0.00 3.891±2.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001N8 CIL_0001N8_0001 CGP 1:59296638-59876378
CIL_0008N0 CIL_0008N0_0001 VISTA 1:59336952-59939819
CIL_000052 CIL_000052_0002 CGP 1:59814786-59926790

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005874 IEA microtubule
GO:0007032 IMP endosome organization
GO:0007040 IMP lysosome organization
GO:0007275 IEA multicellular organismal development
GO:0007286 IEA spermatid development
GO:0008333 IMP endosome to lysosome transport
GO:0015031 IEA protein transport
GO:0015630 IEA microtubule cytoskeleton
GO:0030897 IDA HOPS complex
GO:0042802 IPI identical protein binding
GO:0045022 IMP early endosome to late endosome transport
GO:0070695 IDA FHF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030306 Hook1-001 protein_coding Mus_musculus 0 2483
ENSMUST00000125627 Hook1-003 processed_transcript Mus_musculus 0 1810
ENSMUST00000141448 Hook1-005 processed_transcript Mus_musculus 0 1748
ENSMUST00000107083 Hook1-002 protein_coding Mus_musculus 0 745
ENSMUST00000146947 Hook1-006 processed_transcript Mus_musculus 0 531
ENSMUST00000143326 Hook1-011 processed_transcript Mus_musculus 0 353
ENSMUST00000125584 Hook1-009 processed_transcript Mus_musculus 0 302
ENSMUST00000156910 Hook1-004 processed_transcript Mus_musculus 2e-31 143

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