C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SPO11 meiotic protein covalently bound to DSB | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000371260  |
SPO11-003 |
ENSG00000054796 |
9606 | + |
20:57329859-57343994  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008YW | CIL_0008YW_0001 | VISTA | 20:56856738-57458908 |
| CIL_0008TD | CIL_0008TD_0001 | VISTA | 20:56859467-57462541 |
| CIL_0008HJ | CIL_0008HJ_0001 | VISTA | 20:57109440-57710361 |
| CIL_0008BA | CIL_0008BA_0001 | VISTA | 20:57139654-57744237 |
| CIL_0006IN | CIL_0006IN_0002 | CGP | 20:57168748-57343994 |
| CIL_0002XR | CIL_0002XR_0001 | CGP | 20:57329759-57379211 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000737 | IEA | DNA catabolic process, endonucleolytic |
| GO:0003677 | IEA | DNA binding |
| GO:0003824 | IEA | catalytic activity |
| GO:0005524 | IEA | ATP binding |
| GO:0005694 | IEA | chromosome |
| GO:0006259 | IEA | DNA metabolic process |
| GO:0007131 | IEA | reciprocal meiotic recombination |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000109125
|
Spo11-003 | protein_coding | Mus_musculus | 0 | 813 |
|
ENSMUST00000109126
|
Spo11-002 | protein_coding | Mus_musculus | 0 | 233 |
|
ENSMUST00000050442
|
Spo11-001 | protein_coding | Mus_musculus | 0.0000000000001 | 82 |
