C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, Shab-related subfamily, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371741 KCNB1-001 ENSG00000158445 9606 - 20:49363877-49482647 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371741
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371741 0.650±0.00 0.182±0.00 0.058±0.00 6.238±0.13 2.487±1.94 0.880±0.51 0.881±0.67 0.447±0.05 2.449±0.77 0.092±0.02 0.490±0.09 0.246±0.24 0.171±0.07 0.722±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IT CIL_0006IT_0002 CGP 20:49363877-49568146

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005249 IEA voltage-gated potassium channel activity
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006112 TAS energy reserve metabolic process
GO:0006811 IEA ion transport
GO:0006813 IEA potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0008076 IEA voltage-gated potassium channel complex
GO:0015271 IEA outward rectifier potassium channel activity
GO:0016020 IEA membrane
GO:0030425 IEA dendrite
GO:0032590 IEA dendrite membrane
GO:0032809 IEA neuronal cell body membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043025 IEA neuronal cell body
GO:0044281 TAS small molecule metabolic process
GO:0045211 IEA postsynaptic membrane
GO:0047485 IEA protein N-terminus binding
GO:0050796 TAS regulation of insulin secretion
GO:0051259 IEA protein oligomerization
GO:0051260 IEA protein homooligomerization
GO:0055085 IEA transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059826 Kcnb1-001 protein_coding Mus_musculus 0 3044
ENSMUST00000131267 Kcnb1-002 processed_transcript Mus_musculus 0 503

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