C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peroxiredoxin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372079 PRDX1-003 ENSG00000117450 9606 - 1:45511051-45521854 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLungMuscleOvaryPlacentaENST00000372079
Transcript ID Adipose Adrenal Breast Kidney Lung Muscle Ovary Placenta
ENST00000372079 37.221±0.00 82.934±0.00 42.427±0.00 140.600±0.00 66.352±0.00 54.341±0.00 50.964±0.00 67.905±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0051920 IEA peroxiredoxin activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135573 Prdx1-001 protein_coding Mus_musculus 0 329
ENSMUST00000106470 Prdx1-003 protein_coding Mus_musculus 0 318
ENSMUST00000180210 Gm21399-201 processed_pseudogene Mus_musculus 0 316
ENSMUST00000062591 Gm7204-201 processed_pseudogene Mus_musculus 0 311
ENSMUST00000030454 Prdx1-006 protein_coding Mus_musculus 0 204
ENSMUST00000159103 Gm15974-001 processed_pseudogene Mus_musculus 0 202
ENSMUST00000151129 Prdx1-004 protein_coding Mus_musculus 1.99965e-42 176

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