C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear transport factor 2-like export factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372103 NXT2-003 ENSG00000101888 9606 + X:109537118-109543206 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverOvaryPlacentaENST00000372103
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta
ENST00000372103 0.247±0.00 0.523±0.00 1.332±0.00 0.311±0.00 0.542±0.00 1.883±0.00 0.922±0.00 3.334±0.00 4.475±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JK CIL_0006JK_0001 CGP X:109372906-109544690
CIL_0007A1 CIL_0007A1_0001 CGP X:109535781-109625172

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006810 IEA transport
GO:0015031 IEA protein transport
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112913 Nxt2-004 protein_coding Mus_musculus 0 682
ENSMUST00000112914 Nxt2-001 protein_coding Mus_musculus 0 682
ENSMUST00000042329 Nxt2-002 protein_coding Mus_musculus 0 682
ENSMUST00000112916 Nxt2-003 protein_coding Mus_musculus 0 682
ENSMUST00000138877 Nxt2-005 retained_intron Mus_musculus 1e-27 128

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