C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphopantothenoylcysteine synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372561 PPCS-001 ENSG00000127125 9606 + 1:42456559-42460414 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372561
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372561 7.367±0.00 9.172±0.00 4.470±0.00 4.253±0.00 4.371±2.03 5.425±1.79 5.263±2.93 10.662±8.46 12.038±0.00 5.365±2.05 2.640±1.63 10.596±3.56 16.853±0.09 12.089±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005B0 CIL_0005B0_0002 CGP 1:42380795-42456267

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004632 IDA phosphopantothenate--cysteine ligase activity
GO:0005829 TAS cytosol
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0009108 TAS coenzyme biosynthetic process
GO:0015937 IEA coenzyme A biosynthetic process
GO:0015939 TAS pantothenate metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030385 Ppcs-001 protein_coding Mus_musculus 0 1007
ENSMUST00000140641 Ppcs-003 retained_intron Mus_musculus 0 490
ENSMUST00000106316 Ppcs-002 protein_coding Mus_musculus 0 490

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