C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cullin 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372647 CUL9-005 ENSG00000112659 9606 + 6:43182185-43224585 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverLungPlacentaENST00000372647
Transcript ID Kidney Liver Lung Placenta
ENST00000372647 0.248±0.00 0.198±0.00 0.818±0.00 0.564±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008270 IEA zinc ion binding
GO:0031461 IEA cullin-RING ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066026 Cul9-201 protein_coding Mus_musculus 0 5559
ENSMUST00000182485 Cul9-001 protein_coding Mus_musculus 0 5559
ENSMUST00000182530 Cul9-003 retained_intron Mus_musculus 0 2318
ENSMUST00000182315 Cul9-004 retained_intron Mus_musculus 0 2278
ENSMUST00000183078 Cul9-002 retained_intron Mus_musculus 0 2145
ENSMUST00000182799 Cul9-007 retained_intron Mus_musculus 0 1303
ENSMUST00000145567 Cul7-002 nonsense_mediated_decay Mus_musculus 0 933
ENSMUST00000043464 Cul7-001 protein_coding Mus_musculus 0 933
ENSMUST00000182451 Cul9-010 retained_intron Mus_musculus 0 723
ENSMUST00000183163 Cul9-006 retained_intron Mus_musculus 0 547
ENSMUST00000182668 Cul9-005 retained_intron Mus_musculus 0 414
ENSMUST00000133393 Cul7-003 nonsense_mediated_decay Mus_musculus 0 346
ENSMUST00000144966 Cul7-007 processed_transcript Mus_musculus 8.00001e-42 178
ENSMUST00000132790 Cul7-004 retained_intron Mus_musculus 8.00001e-42 178
ENSMUST00000151002 Cul7-005 retained_intron Mus_musculus 0.0000000000002 84

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