C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) binding protein, cytoplasmic 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372824 PABPC1L-004 ENSG00000101104 9606 + 20:44931562-44939317 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000372824
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000372824 1.029±0.00 0.251±0.00 0.325±0.00 0.345±0.00 0.241±0.00 0.129±0.08 5.251±0.00 0.752±0.00 13.409±10.59 0.314±0.12 2.946±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UV CIL_0003UV_0001 CGP 20:44885676-44959035
CIL_0002ZU CIL_0002ZU_0001 CGP 20:44910062-44960486

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067715 Pabpc1l-001 protein_coding Mus_musculus 0 294

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