C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372839 YWHAB-001 ENSG00000166913 9606 + 20:44885711-44908532 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372839
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372839 6.674±0.00 4.602±0.00 6.533±2.25 4.597±1.58 3.309±0.00 5.003±2.38 3.842±0.00 3.579±0.67 27.563±24.19 40.582±28.93 16.342±3.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IP CIL_0006IP_0002 CGP 20:44751808-44908532
CIL_0003UV CIL_0003UV_0001 CGP 20:44885676-44959035

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000165 TAS MAPK cascade
GO:0000186 TAS activation of MAPKK activity
GO:0003714 IEA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005925 IDA focal adhesion
GO:0006605 IEA protein targeting
GO:0006915 TAS apoptotic process
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007264 TAS small GTPase mediated signal transduction
GO:0007265 TAS Ras protein signal transduction
GO:0007411 TAS axon guidance
GO:0008022 IEA protein C-terminus binding
GO:0008286 TAS insulin receptor signaling pathway
GO:0008543 TAS fibroblast growth factor receptor signaling pathway
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0017053 IEA transcriptional repressor complex
GO:0019899 IPI enzyme binding
GO:0019904 IPI:IEA protein domain specific binding
GO:0030659 TAS cytoplasmic vesicle membrane
GO:0032403 IEA protein complex binding
GO:0035308 IDA negative regulation of protein dephosphorylation
GO:0035329 TAS hippo signaling
GO:0038095 TAS Fc-epsilon receptor signaling pathway
GO:0042826 IPI histone deacetylase binding
GO:0043085 IDA positive regulation of catalytic activity
GO:0043234 IEA protein complex
GO:0045087 TAS innate immune response
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0048471 IDA perinuclear region of cytoplasm
GO:0050815 IPI phosphoserine binding
GO:0051219 IPI phosphoprotein binding
GO:0051220 IDA cytoplasmic sequestering of protein
GO:0051291 IEA protein heterooligomerization
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome
GO:0097193 TAS intrinsic apoptotic signaling pathway
GO:1900740 TAS positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018470 Ywhab-001 protein_coding Mus_musculus 0 1517
ENSMUST00000131288 Ywhab-002 protein_coding Mus_musculus 0 640
ENSDART00000025940 ywhaba-001 protein_coding Danio_rerio 0 571
ENSDART00000143458 ywhaba-002 protein_coding Danio_rerio 0 505
ENSDART00000080486 ywhag1-001 protein_coding Danio_rerio 4e-36 158

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