C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ubiquitin related modifier 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000372850  |
URM1-002 |
ENSG00000167118 |
9606 | + |
9:128371361-128390734  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007EA | CIL_0007EA_0001 | CGP | 9:128340646-128392016 |
| CIL_0000ST | CIL_0000ST_0002 | CGP | 9:128371319-128437351 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0002098 | IMP | tRNA wobble uridine modification |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IEA | cytoplasm |
| GO:0005829 | IC | cytosol |
| GO:0016783 | IDA | sulfurtransferase activity |
| GO:0032447 | IEA | protein urmylation |
| GO:0034227 | IMP:IEA | tRNA thio-modification |
| GO:0070062 | IDA | extracellular vesicular exosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000123021
|
Urm1-006 | retained_intron | Mus_musculus | 0 | 453 |
|
ENSMUST00000091142
|
Urm1-001 | protein_coding | Mus_musculus | 0 | 453 |
|
ENSMUST00000147325
|
Urm1-003 | processed_transcript | Mus_musculus | 0 | 226 |
|
ENSMUST00000156944
|
Urm1-002 | processed_transcript | Mus_musculus | 0 | 217 |
|
ENSMUST00000149379
|
Urm1-004 | processed_transcript | Mus_musculus | 2.00386e-43 | 182 |
