C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: akirin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372984 AKIRIN1-005 ENSG00000174574 9606 + 1:38991288-39004854 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000372984
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000372984 2.376±0.00 6.084±0.00 21.324±0.00 6.972±0.00 4.662±2.90 8.502±0.00 11.142±0.00 4.628±0.00 10.807±5.36 17.107±0.00 30.991±15.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PZ CIL_0008PZ_0001 VISTA 1:38426937-39028462
CIL_0008G7 CIL_0008G7_0001 VISTA 1:38483085-39084457
CIL_0007Q3 CIL_0007Q3_0001 VISTA 1:38525828-39126769
CIL_000990 CIL_000990_0001 VISTA 1:38863737-39466035

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102636 Akirin1-001 protein_coding Mus_musculus 0 1208
ENSMUST00000153472 Akirin1-002 processed_transcript Mus_musculus 0 327
ENSMUST00000173570 Gm6623-001 processed_pseudogene Mus_musculus 0 265
ENSMUST00000174752 Gm6659-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000119676 Akirin1-ps-001 processed_pseudogene Mus_musculus 9.94922e-44 180

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