C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: progastricsin (pepsinogen C)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373025 PGC-001 ENSG00000096088 9606 - 6:41736711-41747397 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyLiverLungOvaryPlacentaTestisENST00000373025
Transcript ID Adipose Breast Kidney Liver Lung Ovary Placenta Testis
ENST00000373025 0.431±0.00 0.090±0.00 0.054±0.00 0.204±0.00 44.600±0.93 0.323±0.20 0.270±0.16 0.257±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QG CIL_0007QG_0001 VISTA 6:41166717-41767957
CIL_0008IB CIL_0008IB_0001 VISTA 6:41169077-41770286
CIL_0008XI CIL_0008XI_0001 VISTA 6:41187113-41790491
CIL_00093V CIL_00093V_0001 VISTA 6:41255486-41855939
CIL_000963 CIL_000963_0001 VISTA 6:41292979-41894337

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004190 IEA aspartic-type endopeptidase activity
GO:0005615 TAS extracellular space
GO:0006508 IEA proteolysis
GO:0007586 IEA digestion
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024782 Pgc-001 protein_coding Mus_musculus 0 830

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