C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) binding protein, cytoplasmic 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373105 PABPC5-002 ENSG00000174740 9606 + X:91434595-91437000 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373105
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373105 0.622±0.00 0.309±0.00 0.379±0.02 0.558±0.00 0.200±0.00 0.169±0.02 0.290±0.09 0.375±0.00 0.170±0.00 0.163±0.00 1.375±1.33 0.175±0.07 0.547±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007B7 CIL_0007B7_0001 CGP X:89921882-91438584
CIL_0007B8 CIL_0007B8_0001 CGP X:91434595-92623230

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113366 Pabpc5-002 protein_coding Mus_musculus 0 887
ENSMUST00000040961 Pabpc5-001 protein_coding Mus_musculus 0 887

Loading