C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bladder cancer associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373537 BLCAP-001 ENSG00000166619 9606 - 20:37517417-37527931 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373537
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373537 27.525±0.00 25.884±0.00 6.339±0.00 38.730±15.98 32.951±28.84 12.696±4.93 8.185±6.91 28.601±16.98 10.894±6.23 3.433±0.00 22.287±0.00 33.943±5.29 48.689±1.57 38.447±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Y4 CIL_0006Y4_0001 CGP 20:37344685-37527931

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007049 IEA cell cycle
GO:0016021 IEA integral component of membrane
GO:0030262 IDA apoptotic nuclear changes

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109528 Blcap-001 protein_coding Mus_musculus 0 1360
ENSMUST00000088494 Blcap-002 protein_coding Mus_musculus 0 1271
ENSMUST00000182781 Gm3852-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000173378 Blcap-005 protein_coding Mus_musculus 0 370
ENSDART00000073847 blcap-001 protein_coding Danio_rerio 0 270
ENSMUST00000134239 Blcap-004 processed_transcript Mus_musculus 0 213

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