Transcript ID | Breast | Lung | Muscle |
---|---|---|---|
ENST00000374152 | 1.993±0.00 | 1.976±0.00 | 2.153±0.00 |
Transcript Info |
||||||
Description: | AT rich interactive domain 1A (SWI-like) | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000374152 | ARID1A-003 | ENSG00000117713 | 9606 | + | 1:26729380-26780756 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0007T4 | CIL_0007T4_0001 | VISTA | 1:26423129-27024414 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000790 | IDA | nuclear chromatin |
GO:0003677 | NAS:IEA | DNA binding |
GO:0003713 | NAS | transcription coactivator activity |
GO:0005488 | IEA | binding |
GO:0005515 | IPI | protein binding |
GO:0005622 | IEA | intracellular |
GO:0005634 | IDA | nucleus |
GO:0006337 | IDA | nucleosome disassembly |
GO:0006338 | IDA:IEA | chromatin remodeling |
GO:0006351 | IEA | transcription, DNA-templated |
GO:0006357 | NAS | regulation of transcription from RNA polymerase II promoter |
GO:0016514 | IDA | SWI/SNF complex |
GO:0016922 | IPI | ligand-dependent nuclear receptor binding |
GO:0030520 | IDA | intracellular estrogen receptor signaling pathway |
GO:0030521 | IDA | androgen receptor signaling pathway |
GO:0042766 | TAS | nucleosome mobilization |
GO:0042921 | IDA | glucocorticoid receptor signaling pathway |
GO:0045893 | IDA | positive regulation of transcription, DNA-templated |
GO:0048096 | TAS | chromatin-mediated maintenance of transcription |
GO:0071564 | ISS | npBAF complex |
GO:0071565 | ISS | nBAF complex |
GO:0090544 | IEA | BAF-type complex |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000105897 | Arid1a-201 | protein_coding | Mus_musculus | 0 | 8137 |
ENSMUST00000008024 | Arid1a-002 | protein_coding | Mus_musculus | 0 | 8059 |
ENSMUST00000145664 | Arid1a-001 | protein_coding | Mus_musculus | 0 | 8059 |
ENSMUST00000138473 | Arid1a-003 | retained_intron | Mus_musculus | 0 | 1522 |
ENSMUST00000139709 | Arid1a-004 | protein_coding | Mus_musculus | 0 | 645 |
ENSMUST00000168582 | Arid1a-006 | retained_intron | Mus_musculus | 0 | 538 |
ENSDART00000084263 | arid1aa-201 | protein_coding | Danio_rerio | 0 | 508 |
ENSDART00000135930 | arid1aa-001 | protein_coding | Danio_rerio | 0 | 508 |