C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: INTS3 and NABP interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374242 INIP-001 ENSG00000148153 9606 - 9:112683926-112718236 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374242
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374242 1.129±0.00 1.074±0.00 3.513±2.43 2.130±1.18 1.345±0.64 1.944±0.00 1.682±1.42 1.570±0.00 0.933±0.00 0.308±0.00 3.072±0.20 2.034±0.42 1.622±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022E CIL_00022E_0002 CGP 9:112486847-112718236
CIL_0005X4 CIL_0005X4_0001 CGP 9:112683926-112881671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006281 IMP DNA repair
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0010212 IMP response to ionizing radiation
GO:0070876 IDA SOSS complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095063 Inip-001 protein_coding Mus_musculus 0 501
ENSMUST00000107526 Inip-004 protein_coding Mus_musculus 0 433
ENSMUST00000143756 Inip-005 protein_coding Mus_musculus 0 372
ENSMUST00000128548 Inip-002 processed_transcript Mus_musculus 0 222
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000006 58
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000006 58

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