C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquinol-cytochrome c reductase complex assembly factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374384 UQCC1-012 ENSG00000101019 9606 - 20:35302566-35411973 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374384
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374384 1.342±0.00 6.843±0.00 4.018±0.00 17.927±0.00 8.392±0.00 4.789±0.00 1.943±0.00 11.353±0.00 5.256±0.00 2.658±0.73 4.612±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0001 VISTA 20:35018152-35620688
CIL_0006RU CIL_0006RU_0002 CGP 20:35285731-35412141
CIL_0005FR CIL_0005FR_0001 CGP 20:35302566-35435450

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005743 IDA mitochondrial inner membrane
GO:0034551 IDA mitochondrial respiratory chain complex III assembly
GO:0070131 IDA positive regulation of mitochondrial translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109632 Uqcc1-012 protein_coding Mus_musculus 0 1040
ENSMUST00000146995 Uqcc1-004 processed_transcript Mus_musculus 0 619
ENSMUST00000141501 Uqcc1-008 retained_intron Mus_musculus 0 619
ENSMUST00000123790 Uqcc1-007 retained_intron Mus_musculus 0 619
ENSMUST00000109636 Uqcc1-001 protein_coding Mus_musculus 0 619
ENSMUST00000136933 Uqcc1-002 nonsense_mediated_decay Mus_musculus 0 604
ENSMUST00000162749 Uqcc1-017 processed_transcript Mus_musculus 0 540
ENSMUST00000152818 Uqcc1-003 processed_transcript Mus_musculus 0 462
ENSMUST00000151078 Uqcc1-014 nonsense_mediated_decay Mus_musculus 0 459
ENSMUST00000139232 Uqcc1-011 protein_coding Mus_musculus 0 455
ENSMUST00000162258 Uqcc1-015 retained_intron Mus_musculus 0 442
ENSMUST00000142655 Uqcc1-006 protein_coding Mus_musculus 0 331
ENSMUST00000133726 Uqcc1-019 nonsense_mediated_decay Mus_musculus 0 313
ENSMUST00000006036 Uqcc1-013 protein_coding Mus_musculus 0 313
ENSMUST00000109631 Uqcc1-010 protein_coding Mus_musculus 0 309
ENSMUST00000155680 Uqcc1-005 retained_intron Mus_musculus 0 235
ENSMUST00000152766 Uqcc1-009 protein_coding Mus_musculus 0 224
ENSMUST00000159238 Uqcc1-016 protein_coding Mus_musculus 4e-35 154

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